Links to NMR WWW Resources

• NMR Related Database Resources

• NMR Research Groups
• NMR Facilities
• Biomolecular Structure
• Biomolecular Classification and Sequence
• Biomolecular Function
• Academic and Commercial Software
• NMR Resource Vendors
• Miscellaneous NMR or Other WWW Sites

NMR Related Database Resources

• Carbohydrate Databases
  

  FTNMR FID Archive (small molecules)
  

  Indiana Dynamics Database
  

  PESCADOR - a database for peptide solution conformation
  

  SDBS (Integrated Spectral Data Base System for Organic Compounds
  

  StarDOM - STAR to XML conversion software and BMRB as XML
  

  WWW Database Gateway to BioMagResBank at NIH

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• Ad Bax Group
  
• Andrew Byrd group (NCI-FCRDC)
  
• Bijvoet Center for Biomolecular Research - Dept. of NMR Spectroscopy
  
• Iain Campbell group
  
• David Case group (Scripps)
  
• Walter Chazin group (Scripps)
  
• Juli Feigon group (UCLA)
  
• Tom James group (UCSF Magnetic Resonance Laboratory)
  
• Lewis Kay group (University of Toronto)
  
• John Markley group - NMRFAM (National Magnetic Resonance Facility at Madison)
  
• Gaetano Montelione group (Rutgers University)
  
• Eric Oldfield group (University of Illinois-Urbana)
  
• Art Palmer group (Columbia University)
  
• Martin Stone group (Indiana University)
  
• Structural Biology at NIH (NMR Spectroscopy)
  
• Michael F. Summers group (Howard Hughes Medical Institute at the Univ. of Maryland)
  
• Mike Sutcliffe group (Department of Chemistry, University of Leicester, U.K.)
  
• David Wemmer group (UC Berkeley)
  
• Jon Waltho and Mike Williamson group
  
• Wright/Dyson group (Scripps)
  
• Kurt Wuthrich group (ETH Zurich)

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NMR Facilities

• Agricultural and Food Chemistry NMR Facility (Univ. of Illinois at Urbana-Champaign)
  
• Arizona State
  
• Bijvoet Center for Biomolecular Research - Dept. of NMR Spectroscopy
  
• Colorado State
  
• National High Magnetic Field Laboratory
  
• NMRFAM (National Magnetic Resonance Facility at Madison)
  
• Resource for Solid-State NMR of Proteins (University of Pennsylvania)

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• Amino Acid Chemistry and Structure
  
• Atlas of Protein Side-Chain Interactions
  
• Atlas of Side-Chain and Main-Chain Hydrogen Bonding
  
• Bioinformatics Centre (National University of Singapore)
  
• Biotech Validation Suite for Protein Structures
  
• CCDC - Cambridge Crystallographic Data Centre
  
• Carbohydrate Databases
  
• CATH, Protein Structure Classification
  
• Complex Carbohydrate Research Center
  
• DALI - Comparison of Protein Structures in 3D
  
• 3Dee - A Database of Protein Domain Definitions
  
• EBI - European Bioinformatics Institute
  
• GRAMM - Global Range Molecular Matching
  
• HIC-Up - Hetero-compound Information Centre - Uppsula
  
• HIV Protease Database
  
• LPFC - A Library of Protein Family Cores
  
• MOOSE - Macromolecular Structure Database
  
• NAOMI - 3D protein structure analysis
  
• Nucleic Acid Database (NDB)
  
• OLDERADO - On Line Database of Ensemble Representatives and Domains
  
• PROLYSIS (resource for proteases and protease inhibitors)
  
• PROMISE (The Prosthetic Groups and Metal Ions in Protein Active Sites Database)
  
• Protein Data Bank (PDB)
  
• Protein Motions Database
  
• Protein Kinase Resource
  
• Protein Structure Verification-Biotech Server
  
• ReLiBase - Structural data about receptor/ligand complexes
  
• Research Collaboratory for Structural Bioinformatics (new PDB)
  
• Resources for Macromolecular Structure Information
  
• SCOP - Structural Classification of Proteins
  
• WPDB - Windows protein structure database search and display tool
  
• WHAT IF homepage

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• Agricultural Genome Information System
  
• BCM Search Launcher - single point-of-entry for molecular biology-related search and analysis services
  
• CATH, Protein Structure Classification
  
• DDBASE - A database of protein structural domains
  
• ENZYME - Enzyme Nomenclature Database
  
• ExPASy
  
• GDB - Genome Data Base
  
• GenBank
  
• NCBI - National Center for Biotechnology Information
  
• Protein Identification Resource
  
• Protein Research Foundation - a literature and sequence database
  
• PROTOMAP - Hierarchical classification of SWISS-PROT
  
• Sequence Retrieval System
  
• SWISS-PROT
  
• NCBI - Taxonomy Resources Page
  
• ICTVdB - Virus database query page
  
• NCBI - Taxonomy query page

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Biomolecular Function

• EcoCyc (Encyclopedia of E.Coli Genes and Metabolism)
  
• Klotho: Biochemical Compounds Declarative Database

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Academic and Commercial Software

• Acorn NMR
  
• AMBER
  
• ANSIG - Assignment of NMR Spectra by Interactive Graphics
  
• AQUA - Software for Analyzing the Quality of NMR Structures
  
• DIANA - Distance Geometry Algorithm for NMR Applications
  
• DYANA - Dynamic Algorithms for NMR Applications
  
• Educational NMR Software (compilation of WWW sites)
  
• EPMOD - Empirical Prediction of Magnetic Orientation and Dipolar Splittings in NMR Spectra
  
• FANTOM - Fast Newton - Raphson Torsion Angle Minimizer
  
• GARANT - General Algorithm for Resonance Assignment
  
• GENXPK - Generate crosspeak locations for high-dimensional NMR spectra
  
• gOpenMol - Molecular display software
  
• ModelFree - A program for optimizing "Lipari-Szabo model free" parameters to heteronuclear relaxation data
  
• Molecular Simulations
  
• MOLMOL - Molecular Analysis and Molecule Display
  
• MolScript
  
• NMRCLUSTER - Clustering An Ensemble Of NMR-Derived Protein Structures Into Conformationally-Related Subfamilies
  
• NMRCORE - Core atoms and domains in an ensemble of NMR structures
  
• NMRPipe
  
• Peakpick - software for peak picking using Felix
  
• PENCE - Software for Chemical Shift Analysis and NMR Assignments
  
• POMA - Product Operator Formalism in Mathematica
  
• PROCHECK
  
• PROCHECK-NMR
  
• PROCOMP - Protein structure comparison
  
• Pronto
  
• PROSA - Processing Algorithms
  
• SBIN - "structural bioinformatics" programs for sequence pattern and profile analysis
  
• SINCRIS - database of software for Crystallography and NMR
  
• Sparky - NMR Assignment and Integration
  
• SPASM - programs for the analysis of main and side chain motifs in protein structures
  
• Spectrum Research - Variety of software for NMR spectral analysis
  
• TALOS - Torsion Angle Likelihood Obtained from Shift and sequence similarity
  
• UCLA-DOE software and servers for biomolecular structure analysis
  
• XEASY - ETH Automated Spectroscopy for X Window Systems
  
• X-PLOR(on line)

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NMR Vendors

• American Magnetics
  
• Bruker
  
• Bruker USA
  
• Cambridge Isotope Laboratories
  
• Chemical Concepts
  
• CORTEC
  
• Hitachi
  
• Hypercube
  
• ISOTEC
  
• JEOL USA
  
• Larmor Letter (used equipment)
  
• MR Resources
  
• Numare Spectralab
  
• Oxford Cryosystems
  
• Spectral Data Services
  
• Spectrum Research, LLC
  
• Varian
  
• VLI Research
  
• Wilmad Glass

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Miscellaneous NMR or Other WWW Sites

• AMMRL - Association of Managers in Magnetic Resonance Laboratories
  
• ALMA - Analytical Laboratory Managers Association
  
• Experimental NMR Conference
  
• NMR Encyclopedia
  
• NMR Newsletter
  
• NMR Spectroscopy
  
• NMR Periodic Table

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