NMR Related Database Resources
NMR Related Database ResourcesCarbohydrate Databases FTNMR FID Archive (small molecules) Indiana Dynamics Database PESCADOR - a database for peptide solution conformation SDBS (Integrated Spectral Data Base System for Organic Compounds StarDOM - STAR to XML conversion software and BMRB as XML WWW Database Gateway to BioMagResBank at NIH Goto Index NMR Research GroupsAd Bax Group Andrew Byrd group (NCI-FCRDC) Bijvoet Center for Biomolecular Research - Dept. of NMR Spectroscopy Iain Campbell group David Case group (Scripps) Walter Chazin group (Scripps) Juli Feigon group (UCLA) Tom James group (UCSF Magnetic Resonance Laboratory) Lewis Kay group (University of Toronto) John Markley group - NMRFAM (National Magnetic Resonance Facility at Madison) Gaetano Montelione group (Rutgers University) Eric Oldfield group (University of Illinois-Urbana) Art Palmer group (Columbia University) Martin Stone group (Indiana University) Structural Biology at NIH (NMR Spectroscopy) Michael F. Summers group (Howard Hughes Medical Institute at the Univ. of Maryland) Mike Sutcliffe group (Department of Chemistry, University of Leicester, U.K.) David Wemmer group (UC Berkeley) Jon Waltho and Mike Williamson group Wright/Dyson group (Scripps) Kurt Wuthrich group (ETH Zurich) Goto Index NMR FacilitiesAgricultural and Food Chemistry NMR Facility (Univ. of Illinois at Urbana-Champaign) Arizona State Bijvoet Center for Biomolecular Research - Dept. of NMR Spectroscopy Colorado State National High Magnetic Field Laboratory NMRFAM (National Magnetic Resonance Facility at Madison) Resource for Solid-State NMR of Proteins (University of Pennsylvania) Goto Index Biomolecular StructureAmino Acid Chemistry and Structure Atlas of Protein Side-Chain Interactions Atlas of Side-Chain and Main-Chain Hydrogen Bonding Bioinformatics Centre (National University of Singapore) Biotech Validation Suite for Protein Structures CCDC - Cambridge Crystallographic Data Centre Carbohydrate Databases CATH, Protein Structure Classification Complex Carbohydrate Research Center DALI - Comparison of Protein Structures in 3D 3Dee - A Database of Protein Domain Definitions EBI - European Bioinformatics Institute GRAMM - Global Range Molecular Matching HIC-Up - Hetero-compound Information Centre - Uppsula HIV Protease Database LPFC - A Library of Protein Family Cores MOOSE - Macromolecular Structure Database NAOMI - 3D protein structure analysis Nucleic Acid Database (NDB) OLDERADO - On Line Database of Ensemble Representatives and Domains PROLYSIS (resource for proteases and protease inhibitors) PROMISE (The Prosthetic Groups and Metal Ions in Protein Active Sites Database) Protein Data Bank (PDB) Protein Motions Database Protein Kinase Resource Protein Structure Verification-Biotech Server ReLiBase - Structural data about receptor/ligand complexes Research Collaboratory for Structural Bioinformatics (new PDB) Resources for Macromolecular Structure Information SCOP - Structural Classification of Proteins WPDB - Windows protein structure database search and display tool WHAT IF homepage Goto Index Biomolecular Classification and Sequence Agricultural Genome Information System BCM Search Launcher - single point-of-entry for molecular biology-related search and analysis services CATH, Protein Structure Classification DDBASE - A database of protein structural domains ENZYME - Enzyme Nomenclature Database ExPASy GDB - Genome Data Base GenBank NCBI - National Center for Biotechnology Information Protein Identification Resource Protein Research Foundation - a literature and sequence database PROTOMAP - Hierarchical classification of SWISS-PROT Sequence Retrieval System SWISS-PROT NCBI - Taxonomy Resources Page ICTVdB - Virus database query page NCBI - Taxonomy query page Goto Index Biomolecular FunctionEcoCyc (Encyclopedia of E.Coli Genes and Metabolism) Klotho: Biochemical Compounds Declarative Database Goto Index Academic and Commercial SoftwareAcorn NMR AMBER ANSIG - Assignment of NMR Spectra by Interactive Graphics AQUA - Software for Analyzing the Quality of NMR Structures DIANA - Distance Geometry Algorithm for NMR Applications DYANA - Dynamic Algorithms for NMR Applications Educational NMR Software (compilation of WWW sites) EPMOD - Empirical Prediction of Magnetic Orientation and Dipolar Splittings in NMR Spectra FANTOM - Fast Newton - Raphson Torsion Angle Minimizer GARANT - General Algorithm for Resonance Assignment GENXPK - Generate crosspeak locations for high-dimensional NMR spectra gOpenMol - Molecular display software ModelFree - A program for optimizing "Lipari-Szabo model free" parameters to heteronuclear relaxation data Molecular Simulations MOLMOL - Molecular Analysis and Molecule Display MolScript NMRCLUSTER - Clustering An Ensemble Of NMR-Derived Protein Structures Into Conformationally-Related Subfamilies NMRCORE - Core atoms and domains in an ensemble of NMR structures NMRPipe Peakpick - software for peak picking using Felix PENCE - Software for Chemical Shift Analysis and NMR Assignments POMA - Product Operator Formalism in Mathematica PROCHECK PROCHECK-NMR PROCOMP - Protein structure comparison Pronto PROSA - Processing Algorithms SBIN - "structural bioinformatics" programs for sequence pattern and profile analysis SINCRIS - database of software for Crystallography and NMR Sparky - NMR Assignment and Integration SPASM - programs for the analysis of main and side chain motifs in protein structures Spectrum Research - Variety of software for NMR spectral analysis TALOS - Torsion Angle Likelihood Obtained from Shift and sequence similarity UCLA-DOE software and servers for biomolecular structure analysis XEASY - ETH Automated Spectroscopy for X Window Systems X-PLOR(on line) Goto Index NMR VendorsAmerican Magnetics Bruker Bruker USA Cambridge Isotope Laboratories Chemical Concepts CORTEC Hitachi Hypercube ISOTEC JEOL USA Larmor Letter (used equipment) MR Resources Numare Spectralab Oxford Cryosystems Spectral Data Services Spectrum Research, LLC Varian VLI Research Wilmad Glass Goto Index Miscellaneous NMR or Other WWW SitesAMMRL - Association of Managers in Magnetic Resonance Laboratories ALMA - Analytical Laboratory Managers Association Experimental NMR Conference NMR Encyclopedia NMR Newsletter NMR Spectroscopy NMR Periodic Table Goto Index